Inflate operation failed: 3
Web12 jan. 2024 · Seems like error -3 just means that the given input isn’t the right format. I checked both the ZIP file I want to extract and a test file that’s the output of … Web[E::inflate_block] inflate failed: progress temporarily not possible, or in () / out () returned an error [E::bgzf_read_block] inflate_block error -1 [E::bgzf_read] bgzf_read_block error -1 after 0 of 4 bytes Failure while decoding file Does anyone have any suggestions what could cause this and how I could fix it?
Inflate operation failed: 3
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Web11 apr. 2011 · Inflating a virtual disk fails with the error: The disk is not thin-provisioned (1037619) Symptoms. Summary. Inflating a virtual disk ... so you do not need to perform the inflate operation. Related Products and Versions. VMware ESX Server; VMware ESX 4.1.x; Languages. English. Last Updated. 2011-04-11 08:00:00. Total Views. 5426 ... Web18 aug. 2011 · In fact, I just did run picard ValidateSamFile on this bam file along with other "normal and good" bam files that can run through picard AddOrReplaceReadGroups. > > Turns out, this bam has odd behavior with ValidateSamFile. > > I used the following command (take out path for simplicty) > > java -Xms16g -Xmx16g -jar picard-tools-1.44 ...
WebI tested that this wasn't velocyto related by running samtools index on the file, which achieved a highly similar error (below), so it's most likely the file itself which is the … Web6 mei 2013 · For JAX-WS clients on WebSphere, the default keep-alive timeout is 5 seconds, which is smaller than the keep-alive timeout usually seen on HTTP servers. Therefore with a well behaved HTTP server, the race condition should never occur. If the HTTP server is not so well behaved and closes the persistent connection too quickly (or …
Web6 mrt. 2024 · scheduled core 3 encountered error in user code, all values of the job will be affected 2: In mclapply(sampleRanges, mc.cores = nCores, FUN = …
WebE.g. samtools mpileup --output-extra FLAG,QNAME,RG,NM in.bam. will display four extra columns in the mpileup output, the first being a list of comma-separated read names, followed by a list of flag values, a list of RG tag values and a list of NM tag values. Field values are always displayed before tag values. --output-sep CHAR.
WebThe inflate() function shall perform one or both of the following actions: . Decompress input data from next_in and update next_in, avail_in and total_in to reflect the data that has been decompressed.. Fill the output buffer referenced by next_out, and update next_out, avail_out, and total_out to reflect the decompressed data that has been placed there. . If … dhhr beckley wv hoursWeb17 nov. 2024 · [E::bgzf_uncompress] Inflate operation failed: 3 [E::bgzf_read] Read block operation failed with error 1 after 0 of 4 bytes [E::csp_fetch_core] failed to pileup snp … dhhr bhhf financial formsWeb14 apr. 2024 · compiler (run gcc --version or clang --version) gcc (GCC) 4.4.7. billzt closed this as completed on Apr 15, 2024. hxj5 mentioned this issue on Nov 17, 2024. Inflate … dhhq falls churchWeb30 aug. 2008 · Error: inflate () returned −3 GUNZIP ERROR − must RESET board to recover Answer: Your kernel p_w_picpath is quite big − nearly 1 MB compressed; when … dhhr benefits applicationWebAll of them, except one, which fails with this error: Decoding file F:\2009.bak.pgp... 32% (2.1GB) F:\2009.bak.pgp:decrypt (3090:operation failed, error decompressing data) Wiping file F:\Temp\pgp-5532-0.tmp... 1% I also tried to decrypt this file on Linux machine with this command: gpg -v <2009.bak.pgp> 2009.bak But it also fails with this error: dhhr blackboard loginWeb[E::inflate_block] inflate failed: progress temporarily not possible, or in () / out () returned an error [E::bgzf_read_block] inflate_block error -1 [E::bgzf_read] bgzf_read_block error … dhhr berkeley countyWeb12 jan. 2024 · The commands were: samtools stats chr7.bam samtools flagstat chr7.bam After doing samtools stats, I ran samtools flagstat and it only produced the 'EOF marker … cigars maitland